rpt (development version)

  • Updated README to cover new template features:

    • Working examples for example_function() and calculate_summary()
    • Multi-format Quarto vignettes/articles (HTML, RevealJS slides, DOCX)
    • slidebreak shortcode for RevealJS, PowerPoint, and Beamer slide decks
    • Mathematical notation in roxygen2 (\eqn{}, \deqn{})
    • Preinstalled Quarto extensions (div-anchors, equation-anchors, callouty-theorem)
    • LaTeX macro submodule at vignettes/macros/
    • Package structure visualization article using foodwebr

  • Updated the docs workflow for altdoc multiversion deployment inspired by etiennebacher/jarl: pushes to main now deploy documentation to /dev/, while releases deploy stable documentation to /.

  • Enhanced the docs site version dropdown to show version numbers: the current release is labeled with its tag (e.g., v1.0.0 (stable)), the development version is labeled with its DESCRIPTION version (e.g., 0.0.0.9017 (dev)), and a “Previous versions” section lists all older release tags with links to their archived docs. Releases are now also deployed to a versioned subdirectory (e.g., /v1.0.0/) so prior docs remain accessible after new releases.

  • Fixed LaTeX macros appearing as visible raw text on the documentation website (#111) by moving the macros git submodule to vignettes/macros/, which includes it in the package tarball and makes it available in both vignettes (R CMD check) and articles (altdoc) via a simple {{< include macros/macros.qmd >}} shortcode; Quarto/pandoc expands the macro definitions at compile time

  • Extended slidebreak shortcode to support all slide deck formats (RevealJS, PowerPoint, Beamer) by checking for revealjs, pptx, and beamer formats explicitly (#103)

  • Added demonstration of mathematical notation in roxygen2 comments using cross-format compatible syntax (\eqn{}, \deqn{})

  • Installed Quarto extensions for enhanced documentation: d-morrison/div-anchors (permalink anchors for theorem/proof divs), d-morrison/equation-anchors (permalink anchors for equations), and sun123zxy/callouty-theorem (render theorems as callout blocks). Added callouty-theorem YAML settings based on d-morrison/rme.

  • Added package structure visualization article using foodwebr to demonstrate function dependencies and call graphs

  • Created layered helper function architecture for realistic foodwebr demonstrations

  • Added calculate_summary() function for computing summary statistics

  • Switched from pkgdown to altdoc for documentation generation. Now using Quarto Website for documentation with native math equation support via MathJax.

  • Removed pkgdown-specific configurations and workflows.

  • Retained RevealJS multi-format support for Quarto vignettes and articles.

  • Fixed index page rendering by switching from index.md to index.qmd to properly process Quarto include directive (#58)

  • Switched from pkgdown to altdoc (#45)

  • Updated lintr configuration to match serodynamics reference with enhanced linter rules

  • PR preview comments now use recreate: true to ensure they always appear at the bottom of the PR conversation, preventing them from being hidden in collapsed sections (#31)

  • Added RevealJS presentation format for Quarto vignettes and articles in pkgdown documentation. HTML pages now display an “Other Formats” section with links to slide versions (#29)

rpt 0.0.0.9000

  • Initial development version